Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrif1Q8CDD9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrif1Q8CDD9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.33■□□□□ 0.04
Lrif1Q8CDD9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lrif1Q8CDD9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrif1Q8CDD9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Gm10566-201ENSMUST00000086739 996 ntBASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrif1Q8CDD9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Gm10819-201ENSMUST00000099988 561 ntBASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lrif1Q8CDD9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lrif1Q8CDD9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lrif1Q8CDD9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms