Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shisa4Q8CA71 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Gm7787-201ENSMUST00000216858 688 ntBASIC17.88■□□□□ 0.45
Shisa4Q8CA71 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shisa4Q8CA71 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Gm10175-201ENSMUST00000086013 645 ntBASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.87■□□□□ 0.45
Shisa4Q8CA71 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.86■□□□□ 0.45
Shisa4Q8CA71 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Gm45747-201ENSMUST00000212203 999 ntBASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shisa4Q8CA71 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.85■□□□□ 0.45
Shisa4Q8CA71 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms