Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim9Q8C7M3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Gm8318-201ENSMUST00000182954 872 ntBASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Gm6089-201ENSMUST00000197666 938 ntBASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim9Q8C7M3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim9Q8C7M3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Rps4l-201ENSMUST00000071745 943 ntBASIC17.02■□□□□ 0.32
Trim9Q8C7M3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim9Q8C7M3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trim9Q8C7M3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim9Q8C7M3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms