Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm6912-201ENSMUST00000117218 544 ntBASIC20.57■□□□□ 0.88
Cps1Q8C196 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC20.57■□□□□ 0.88
Cps1Q8C196 Gm29667-201ENSMUST00000190817 490 ntBASIC20.57■□□□□ 0.88
Cps1Q8C196 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC20.57■□□□□ 0.88
Cps1Q8C196 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cps1Q8C196 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC20.57■□□□□ 0.88
Cps1Q8C196 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC20.56■□□□□ 0.88
Cps1Q8C196 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cps1Q8C196 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cps1Q8C196 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC20.56■□□□□ 0.88
Cps1Q8C196 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cps1Q8C196 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.56■□□□□ 0.88
Cps1Q8C196 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cps1Q8C196 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.55■□□□□ 0.88
Cps1Q8C196 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 AL593843.1-201ENSMUST00000195891 145 ntBASIC20.55■□□□□ 0.88
Cps1Q8C196 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Cps1Q8C196 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cps1Q8C196 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cps1Q8C196 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cps1Q8C196 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cps1Q8C196 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC20.54■□□□□ 0.88
Cps1Q8C196 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Gm4691-201ENSMUST00000182339 1000 ntBASIC20.54■□□□□ 0.88
Cps1Q8C196 Gm2451-201ENSMUST00000199447 999 ntBASIC20.54■□□□□ 0.88
Cps1Q8C196 Gm10290-201ENSMUST00000200451 999 ntBASIC20.54■□□□□ 0.88
Cps1Q8C196 AC090659.2-201ENSMUST00000225378 1186 ntBASIC20.54■□□□□ 0.88
Cps1Q8C196 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cps1Q8C196 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Gm5479-201ENSMUST00000160578 435 ntBASIC20.53■□□□□ 0.88
Cps1Q8C196 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC20.53■□□□□ 0.88
Cps1Q8C196 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC20.53■□□□□ 0.88
Cps1Q8C196 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Shd-206ENSMUST00000225145 998 ntBASIC20.53■□□□□ 0.88
Cps1Q8C196 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cps1Q8C196 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cps1Q8C196 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cps1Q8C196 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cps1Q8C196 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cps1Q8C196 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Cps1Q8C196 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cps1Q8C196 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cps1Q8C196 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cps1Q8C196 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cps1Q8C196 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC20.52■□□□□ 0.87
Cps1Q8C196 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cps1Q8C196 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cps1Q8C196 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms