Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm8655-201ENSMUST00000221159 852 ntBASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Birc2-201ENSMUST00000054878 378 ntBASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sh3rf3Q8C120 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Gm27459-201ENSMUST00000184860 107 ntBASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Gm43347-201ENSMUST00000200226 580 ntBASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Sh3rf3Q8C120 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3rf3Q8C120 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3rf3Q8C120 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms