Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdk5rap1Q8BTW8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm2756-201ENSMUST00000195851 400 ntBASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Cdk5rap1Q8BTW8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdk5rap1Q8BTW8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm27702-201ENSMUST00000184512 56 ntBASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm10175-201ENSMUST00000086013 645 ntBASIC14.64□□□□□ -0.07
Cdk5rap1Q8BTW8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms