Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf7Q8BTV2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Cpsf7Q8BTV2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf7Q8BTV2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 AA414768-201ENSMUST00000121924 1257 ntBASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf7Q8BTV2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms