Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cpne3Q8BT60 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Gm13312-201ENSMUST00000119631 718 ntBASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cpne3Q8BT60 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.94□□□□□ -0.02
Cpne3Q8BT60 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cpne3Q8BT60 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne3Q8BT60 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne3Q8BT60 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne3Q8BT60 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne3Q8BT60 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne3Q8BT60 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne3Q8BT60 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cpne3Q8BT60 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms