Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Gm20553-201ENSMUST00000204205 844 ntBASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scfd1Q8BRF7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Gm9385-201ENSMUST00000117563 472 ntBASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Rpph1-201ENSMUST00000175096 319 ntBASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scfd1Q8BRF7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scfd1Q8BRF7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scfd1Q8BRF7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Scfd1Q8BRF7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scfd1Q8BRF7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scfd1Q8BRF7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scfd1Q8BRF7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Scfd1Q8BRF7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Gm8396-201ENSMUST00000057361 823 ntBASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scfd1Q8BRF7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Gm14701-201ENSMUST00000117156 348 ntBASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scfd1Q8BRF7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Scfd1Q8BRF7 Gm13365-201ENSMUST00000121188 973 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms