Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smco3Q8BQM7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Mir1199-201ENSMUST00000117015 119 ntBASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Gm18421-201ENSMUST00000204122 625 ntBASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smco3Q8BQM7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.75□□□□□ -0.37
Smco3Q8BQM7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco3Q8BQM7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms