Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Gm9103-201ENSMUST00000119371 405 ntBASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clrn3Q8BHH8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Clrn3Q8BHH8 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm8825-201ENSMUST00000182565 998 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm4518-201ENSMUST00000182638 718 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clrn3Q8BHH8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm12644-201ENSMUST00000119935 606 ntBASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm28033-201ENSMUST00000184224 96 ntBASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Gm27867-201ENSMUST00000184778 125 ntBASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clrn3Q8BHH8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms