Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim23Q8BGX0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.91□□□□□ -0.02
Trim23Q8BGX0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Gm43514-201ENSMUST00000198852 424 ntBASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim23Q8BGX0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Gm4899-201ENSMUST00000178708 719 ntBASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Gm8318-201ENSMUST00000182954 872 ntBASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim23Q8BGX0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim23Q8BGX0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms