Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Upk3bQ80YF6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upk3bQ80YF6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upk3bQ80YF6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Upk3bQ80YF6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Upk3bQ80YF6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Gm43799-201ENSMUST00000201845 579 ntBASIC13.07□□□□□ -0.32
Upk3bQ80YF6 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.07□□□□□ -0.32
Upk3bQ80YF6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Mir770-201ENSMUST00000103252 94 ntBASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Upk3bQ80YF6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk3bQ80YF6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms