Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 AC135669.1-201ENSMUST00000213585 412 ntBASIC23.75■■□□□ 1.39
Rpap1Q80TE0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Rpap1Q80TE0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rpap1Q80TE0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Syt7-205ENSMUST00000224135 1557 ntBASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC23.74■■□□□ 1.39
Rpap1Q80TE0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpap1Q80TE0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Gm8597-201ENSMUST00000191525 1109 ntBASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rpap1Q80TE0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Syt7-204ENSMUST00000223586 1344 ntBASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 AC130829.1-201ENSMUST00000221548 494 ntBASIC23.72■■□□□ 1.39
Rpap1Q80TE0 AC124732.1-201ENSMUST00000221551 910 ntBASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Rpap1Q80TE0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Gm14127-201ENSMUST00000117906 678 ntBASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Gm27533-201ENSMUST00000183800 152 ntBASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rpap1Q80TE0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rpap1Q80TE0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rpap1Q80TE0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Gm15593-201ENSMUST00000122085 1008 ntBASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 AC164567.1-201ENSMUST00000219185 960 ntBASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rpap1Q80TE0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms