Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh8Q7TSK3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Gm2756-201ENSMUST00000195851 400 ntBASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh8Q7TSK3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Gm24513-201ENSMUST00000174964 138 ntBASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Gm27397-201ENSMUST00000184997 107 ntBASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh8Q7TSK3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh8Q7TSK3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms