Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Gm13597-201ENSMUST00000121239 375 ntBASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Gm44492-201ENSMUST00000197012 141 ntBASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1l1Q6T3U4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1l1Q6T3U4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Npc1l1Q6T3U4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Npc1l1Q6T3U4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Npc1l1Q6T3U4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1l1Q6T3U4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Gm15920-201ENSMUST00000118998 402 ntBASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1l1Q6T3U4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1l1Q6T3U4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1l1Q6T3U4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms