Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Gm45612-201ENSMUST00000211320 160 ntBASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx58Q6Q899 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx58Q6Q899 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Gm27494-201ENSMUST00000184735 189 ntBASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Gm2272-201ENSMUST00000194903 582 ntBASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx58Q6Q899 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Gm16198-201ENSMUST00000118766 670 ntBASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Mir1895-201ENSMUST00000122615 79 ntBASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx58Q6Q899 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx58Q6Q899 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx58Q6Q899 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ddx58Q6Q899 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ddx58Q6Q899 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms