Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scube3Q66PY1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Scube3Q66PY1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scube3Q66PY1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scube3Q66PY1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Scube3Q66PY1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Gm18489-201ENSMUST00000172565 551 ntBASIC16.2■□□□□ 0.18
Scube3Q66PY1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Gm9682-201ENSMUST00000197505 556 ntBASIC16.2■□□□□ 0.18
Scube3Q66PY1 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.2■□□□□ 0.18
Scube3Q66PY1 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.2■□□□□ 0.18
Scube3Q66PY1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Scube3Q66PY1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Gm4899-201ENSMUST00000178708 719 ntBASIC16.19■□□□□ 0.18
Scube3Q66PY1 Gm37935-201ENSMUST00000192012 982 ntBASIC16.19■□□□□ 0.18
Scube3Q66PY1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scube3Q66PY1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.18■□□□□ 0.18
Scube3Q66PY1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.18■□□□□ 0.18
Scube3Q66PY1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms