Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Col11a2Q64739 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Col11a2Q64739 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.47■□□□□ 0.55
Col11a2Q64739 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.47■□□□□ 0.55
Col11a2Q64739 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col11a2Q64739 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Gm9522-201ENSMUST00000182394 926 ntBASIC18.47■□□□□ 0.55
Col11a2Q64739 Gm8602-201ENSMUST00000184045 607 ntBASIC18.47■□□□□ 0.55
Col11a2Q64739 Gm9908-201ENSMUST00000211534 448 ntBASIC18.47■□□□□ 0.55
Col11a2Q64739 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.47■□□□□ 0.55
Col11a2Q64739 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col11a2Q64739 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Col11a2Q64739 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Col11a2Q64739 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Col11a2Q64739 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Col11a2Q64739 Mir1897-201ENSMUST00000122581 272 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Col11a2Q64739 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm18624-201ENSMUST00000220966 658 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm9899-201ENSMUST00000065519 555 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm15653-201ENSMUST00000119247 907 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm6222-201ENSMUST00000120787 396 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm2451-201ENSMUST00000199447 999 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm10290-201ENSMUST00000200451 999 ntBASIC18.46■□□□□ 0.55
Col11a2Q64739 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC18.46■□□□□ 0.55
Col11a2Q64739 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Col11a2Q64739 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Col11a2Q64739 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.45■□□□□ 0.54
Col11a2Q64739 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.45■□□□□ 0.54
Col11a2Q64739 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Col11a2Q64739 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.45■□□□□ 0.54
Col11a2Q64739 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.45■□□□□ 0.54
Col11a2Q64739 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Gm16476-201ENSMUST00000221544 139 ntBASIC18.45■□□□□ 0.54
Col11a2Q64739 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Col11a2Q64739 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.45■□□□□ 0.54
Col11a2Q64739 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Col11a2Q64739 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.45■□□□□ 0.54
Col11a2Q64739 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Col11a2Q64739 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.44■□□□□ 0.54
Col11a2Q64739 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.44■□□□□ 0.54
Col11a2Q64739 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Col11a2Q64739 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.44■□□□□ 0.54
Col11a2Q64739 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.44■□□□□ 0.54
Col11a2Q64739 Gm18062-201ENSMUST00000208020 547 ntBASIC18.44■□□□□ 0.54
Col11a2Q64739 Gm18055-201ENSMUST00000208254 547 ntBASIC18.44■□□□□ 0.54
Col11a2Q64739 Gm46209-201ENSMUST00000217912 553 ntBASIC18.44■□□□□ 0.54
Col11a2Q64739 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col11a2Q64739 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms