Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Gm46209-201ENSMUST00000217912 553 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.61□□□□□ -0.39
Col7a1Q63870 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.61□□□□□ -0.39
Col7a1Q63870 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col7a1Q63870 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col7a1Q63870 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.6□□□□□ -0.39
Col7a1Q63870 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.6□□□□□ -0.39
Col7a1Q63870 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.6□□□□□ -0.39
Col7a1Q63870 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Gm18054-201ENSMUST00000207539 555 ntBASIC12.6□□□□□ -0.39
Col7a1Q63870 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col7a1Q63870 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.6□□□□□ -0.39
Col7a1Q63870 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col7a1Q63870 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col7a1Q63870 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm27243-201ENSMUST00000183964 521 ntBASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm7593-201ENSMUST00000187246 644 ntBASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm17794-201ENSMUST00000220252 955 ntBASIC12.59□□□□□ -0.39
Col7a1Q63870 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.59□□□□□ -0.39
Col7a1Q63870 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.59□□□□□ -0.39
Col7a1Q63870 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Col7a1Q63870 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.59□□□□□ -0.39
Col7a1Q63870 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.59□□□□□ -0.39
Col7a1Q63870 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Gm5354-201ENSMUST00000182417 973 ntBASIC12.59□□□□□ -0.39
Col7a1Q63870 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col7a1Q63870 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.59□□□□□ -0.39
Col7a1Q63870 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col7a1Q63870 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms