Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sox19Q62249 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sox19Q62249 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox19Q62249 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.21□□□□□ -0.29
Sox19Q62249 Mir5122-201ENSMUST00000175004 89 ntBASIC13.21□□□□□ -0.29
Sox19Q62249 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox19Q62249 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.21□□□□□ -0.29
Sox19Q62249 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox19Q62249 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sox19Q62249 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox19Q62249 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Sox19Q62249 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox19Q62249 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox19Q62249 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox19Q62249 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox19Q62249 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox19Q62249 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox19Q62249 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Sox19Q62249 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox19Q62249 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Sox19Q62249 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Sox19Q62249 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox19Q62249 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox19Q62249 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox19Q62249 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox19Q62249 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.2□□□□□ -0.3
Sox19Q62249 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Sox19Q62249 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox19Q62249 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox19Q62249 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox19Q62249 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox19Q62249 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox19Q62249 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.19□□□□□ -0.3
Sox19Q62249 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox19Q62249 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.19□□□□□ -0.3
Sox19Q62249 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.19□□□□□ -0.3
Sox19Q62249 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sox19Q62249 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.19□□□□□ -0.3
Sox19Q62249 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox19Q62249 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox19Q62249 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox19Q62249 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox19Q62249 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox19Q62249 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.18□□□□□ -0.3
Sox19Q62249 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox19Q62249 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.18□□□□□ -0.3
Sox19Q62249 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox19Q62249 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox19Q62249 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Sox19Q62249 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox19Q62249 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms