Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18■□□□□ 0.47
Scn9aQ62205 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18■□□□□ 0.47
Scn9aQ62205 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Gm12138-201ENSMUST00000122180 951 ntBASIC18■□□□□ 0.47
Scn9aQ62205 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18■□□□□ 0.47
Scn9aQ62205 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18■□□□□ 0.47
Scn9aQ62205 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18■□□□□ 0.47
Scn9aQ62205 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18■□□□□ 0.47
Scn9aQ62205 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn9aQ62205 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.99■□□□□ 0.47
Scn9aQ62205 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Scn9aQ62205 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.99■□□□□ 0.47
Scn9aQ62205 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Scn9aQ62205 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.99■□□□□ 0.47
Scn9aQ62205 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.99■□□□□ 0.47
Scn9aQ62205 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.99■□□□□ 0.47
Scn9aQ62205 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn9aQ62205 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.98■□□□□ 0.47
Scn9aQ62205 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn9aQ62205 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn9aQ62205 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn9aQ62205 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn9aQ62205 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn9aQ62205 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn9aQ62205 Gm28631-201ENSMUST00000190740 334 ntBASIC17.98■□□□□ 0.47
Scn9aQ62205 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn9aQ62205 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Scn9aQ62205 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn9aQ62205 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn9aQ62205 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn9aQ62205 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn9aQ62205 Mir7085-201ENSMUST00000184353 66 ntBASIC17.97■□□□□ 0.47
Scn9aQ62205 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.97■□□□□ 0.47
Scn9aQ62205 Gm43703-201ENSMUST00000200523 763 ntBASIC17.97■□□□□ 0.47
Scn9aQ62205 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.97■□□□□ 0.47
Scn9aQ62205 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn9aQ62205 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.97■□□□□ 0.47
Scn9aQ62205 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Asic1-205ENSMUST00000228185 1818 ntBASIC17.97■□□□□ 0.47
Scn9aQ62205 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.97■□□□□ 0.47
Scn9aQ62205 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.97■□□□□ 0.47
Scn9aQ62205 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn9aQ62205 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.96■□□□□ 0.47
Scn9aQ62205 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.96■□□□□ 0.47
Scn9aQ62205 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn9aQ62205 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn9aQ62205 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.96■□□□□ 0.46
Scn9aQ62205 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Scn9aQ62205 Gm6180-201ENSMUST00000065243 498 ntBASIC17.95■□□□□ 0.46
Scn9aQ62205 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn9aQ62205 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms