Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim27Q62158 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim27Q62158 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Trim27Q62158 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim27Q62158 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.96■□□□□ 0.63
Trim27Q62158 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.96■□□□□ 0.63
Trim27Q62158 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim27Q62158 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim27Q62158 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim27Q62158 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.95■□□□□ 0.62
Trim27Q62158 Gm13884-201ENSMUST00000118103 829 ntBASIC18.95■□□□□ 0.62
Trim27Q62158 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.95■□□□□ 0.62
Trim27Q62158 Gm7230-201ENSMUST00000173026 815 ntBASIC18.95■□□□□ 0.62
Trim27Q62158 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim27Q62158 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim27Q62158 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.95■□□□□ 0.62
Trim27Q62158 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim27Q62158 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim27Q62158 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Trim27Q62158 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim27Q62158 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim27Q62158 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim27Q62158 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.94■□□□□ 0.62
Trim27Q62158 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim27Q62158 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trim27Q62158 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Gm15173-201ENSMUST00000122049 433 ntBASIC18.93■□□□□ 0.62
Trim27Q62158 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.93■□□□□ 0.62
Trim27Q62158 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Gm5864-201ENSMUST00000202263 970 ntBASIC18.93■□□□□ 0.62
Trim27Q62158 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Trim27Q62158 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim27Q62158 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim27Q62158 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim27Q62158 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.93■□□□□ 0.62
Trim27Q62158 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim27Q62158 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim27Q62158 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim27Q62158 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim27Q62158 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim27Q62158 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim27Q62158 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms