Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cd47Q61735 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cd47Q61735 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.1□□□□□ -0.15
Cd47Q61735 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.1□□□□□ -0.15
Cd47Q61735 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cd47Q61735 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.1□□□□□ -0.15
Cd47Q61735 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd47Q61735 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.1□□□□□ -0.15
Cd47Q61735 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.09□□□□□ -0.15
Cd47Q61735 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.09□□□□□ -0.15
Cd47Q61735 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.09□□□□□ -0.15
Cd47Q61735 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.09□□□□□ -0.15
Cd47Q61735 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.09□□□□□ -0.15
Cd47Q61735 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cd47Q61735 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cd47Q61735 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cd47Q61735 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cd47Q61735 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd47Q61735 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cd47Q61735 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cd47Q61735 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cd47Q61735 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cd47Q61735 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.08□□□□□ -0.16
Cd47Q61735 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cd47Q61735 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.08□□□□□ -0.16
Cd47Q61735 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.08□□□□□ -0.16
Cd47Q61735 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.08□□□□□ -0.16
Cd47Q61735 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cd47Q61735 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd47Q61735 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd47Q61735 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cd47Q61735 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd47Q61735 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cd47Q61735 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd47Q61735 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cd47Q61735 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms