Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ecm1Q61508 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.04■□□□□ 0.32
Ecm1Q61508 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ecm1Q61508 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ecm1Q61508 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ecm1Q61508 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ecm1Q61508 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Gm11543-201ENSMUST00000120758 370 ntBASIC17.03■□□□□ 0.32
Ecm1Q61508 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.03■□□□□ 0.32
Ecm1Q61508 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.03■□□□□ 0.32
Ecm1Q61508 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ecm1Q61508 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.02■□□□□ 0.32
Ecm1Q61508 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ecm1Q61508 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ecm1Q61508 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Ecm1Q61508 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Ecm1Q61508 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
Ecm1Q61508 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.02■□□□□ 0.32
Ecm1Q61508 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.02■□□□□ 0.32
Ecm1Q61508 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ecm1Q61508 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.02■□□□□ 0.32
Ecm1Q61508 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.02■□□□□ 0.32
Ecm1Q61508 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ecm1Q61508 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ecm1Q61508 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ecm1Q61508 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ecm1Q61508 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ecm1Q61508 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ecm1Q61508 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.01■□□□□ 0.31
Ecm1Q61508 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ecm1Q61508 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.01■□□□□ 0.31
Ecm1Q61508 Gm13223-201ENSMUST00000118609 747 ntBASIC17.01■□□□□ 0.31
Ecm1Q61508 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.01■□□□□ 0.31
Ecm1Q61508 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ecm1Q61508 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.01■□□□□ 0.31
Ecm1Q61508 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.01■□□□□ 0.31
Ecm1Q61508 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ecm1Q61508 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ecm1Q61508 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.01■□□□□ 0.31
Ecm1Q61508 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ecm1Q61508 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ecm1Q61508 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms