Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six4Q61321 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six4Q61321 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Six4Q61321 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.57■□□□□ 0.08
Six4Q61321 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.57■□□□□ 0.08
Six4Q61321 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Gm11764-201ENSMUST00000120221 623 ntBASIC15.57■□□□□ 0.08
Six4Q61321 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.57■□□□□ 0.08
Six4Q61321 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.57■□□□□ 0.08
Six4Q61321 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.57■□□□□ 0.08
Six4Q61321 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Gm27628-201ENSMUST00000184911 107 ntBASIC15.57■□□□□ 0.08
Six4Q61321 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Six4Q61321 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Six4Q61321 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Six4Q61321 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Six4Q61321 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Six4Q61321 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Six4Q61321 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.56■□□□□ 0.08
Six4Q61321 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.56■□□□□ 0.08
Six4Q61321 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.56■□□□□ 0.08
Six4Q61321 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.56■□□□□ 0.08
Six4Q61321 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.56■□□□□ 0.08
Six4Q61321 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Six4Q61321 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.56■□□□□ 0.08
Six4Q61321 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Six4Q61321 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Six4Q61321 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Six4Q61321 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Six4Q61321 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.55■□□□□ 0.08
Six4Q61321 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Six4Q61321 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Six4Q61321 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.55■□□□□ 0.08
Six4Q61321 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.55■□□□□ 0.08
Six4Q61321 Gm4899-201ENSMUST00000178708 719 ntBASIC15.55■□□□□ 0.08
Six4Q61321 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.55■□□□□ 0.08
Six4Q61321 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Six4Q61321 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Six4Q61321 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Six4Q61321 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.54■□□□□ 0.08
Six4Q61321 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.54■□□□□ 0.08
Six4Q61321 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Six4Q61321 Gm18733-201ENSMUST00000173950 856 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms