Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Mre11Q61216 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Mre11Q61216 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Mre11Q61216 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Mre11Q61216 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
Mre11Q61216 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Mre11Q61216 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Mre11Q61216 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
Mre11Q61216 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.54■□□□□ 0.56
Mre11Q61216 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.54■□□□□ 0.56
Mre11Q61216 Gm6257-201ENSMUST00000163864 910 ntBASIC18.54■□□□□ 0.56
Mre11Q61216 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.54■□□□□ 0.56
Mre11Q61216 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Mre11Q61216 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Mre11Q61216 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.53■□□□□ 0.56
Mre11Q61216 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.53■□□□□ 0.56
Mre11Q61216 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Mre11Q61216 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.53■□□□□ 0.56
Mre11Q61216 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.53■□□□□ 0.56
Mre11Q61216 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.53■□□□□ 0.56
Mre11Q61216 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Mre11Q61216 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Mre11Q61216 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
Mre11Q61216 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Mre11Q61216 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Mre11Q61216 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.52■□□□□ 0.56
Mre11Q61216 Gm7367-201ENSMUST00000057611 492 ntBASIC18.52■□□□□ 0.56
Mre11Q61216 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.52■□□□□ 0.56
Mre11Q61216 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Mre11Q61216 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Mre11Q61216 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mre11Q61216 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mre11Q61216 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mre11Q61216 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Mre11Q61216 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 AC162938.1-201ENSMUST00000213140 2323 ntBASIC18.51■□□□□ 0.55
Mre11Q61216 Gm9856-201ENSMUST00000217077 2578 ntBASIC18.51■□□□□ 0.55
Mre11Q61216 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Mre11Q61216 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms