Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.26□□□□□ -0.29
Clns1aQ61189 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clns1aQ61189 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.25□□□□□ -0.29
Clns1aQ61189 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.25□□□□□ -0.29
Clns1aQ61189 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Clns1aQ61189 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Clns1aQ61189 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.25□□□□□ -0.29
Clns1aQ61189 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.25□□□□□ -0.29
Clns1aQ61189 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Odf3b-204ENSMUST00000227834 930 ntBASIC13.25□□□□□ -0.29
Clns1aQ61189 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Clns1aQ61189 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.25□□□□□ -0.29
Clns1aQ61189 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Clns1aQ61189 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Clns1aQ61189 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Clns1aQ61189 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clns1aQ61189 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Clns1aQ61189 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Clns1aQ61189 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.24□□□□□ -0.29
Clns1aQ61189 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.24□□□□□ -0.29
Clns1aQ61189 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Clns1aQ61189 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.24□□□□□ -0.29
Clns1aQ61189 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.24□□□□□ -0.29
Clns1aQ61189 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Clns1aQ61189 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clns1aQ61189 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clns1aQ61189 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.23□□□□□ -0.29
Clns1aQ61189 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clns1aQ61189 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Gm12527-201ENSMUST00000117967 564 ntBASIC13.23□□□□□ -0.29
Clns1aQ61189 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.23□□□□□ -0.29
Clns1aQ61189 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.23□□□□□ -0.29
Clns1aQ61189 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clns1aQ61189 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.23□□□□□ -0.29
Clns1aQ61189 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clns1aQ61189 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clns1aQ61189 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clns1aQ61189 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Clns1aQ61189 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms