Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.1■□□□□ 0.01
Col12a1Q60847 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Gm12957-201ENSMUST00000117835 377 ntBASIC15.09■□□□□ 0.01
Col12a1Q60847 Gm13226-201ENSMUST00000117838 404 ntBASIC15.09■□□□□ 0.01
Col12a1Q60847 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Mir1982-201ENSMUST00000157368 74 ntBASIC15.09■□□□□ 0.01
Col12a1Q60847 Gm5035-201ENSMUST00000215581 927 ntBASIC15.09■□□□□ 0.01
Col12a1Q60847 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Gm20445-201ENSMUST00000061905 565 ntBASIC15.09■□□□□ 0.01
Col12a1Q60847 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.09■□□□□ 0.01
Col12a1Q60847 Gm37424-201ENSMUST00000191727 561 ntBASIC15.09■□□□□ 0.01
Col12a1Q60847 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Col12a1Q60847 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Col12a1Q60847 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col12a1Q60847 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.08■□□□□ 0.01
Col12a1Q60847 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Col12a1Q60847 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col12a1Q60847 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col12a1Q60847 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Col12a1Q60847 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.08■□□□□ 0.01
Col12a1Q60847 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.08■□□□□ 0.01
Col12a1Q60847 Gm10499-201ENSMUST00000174094 934 ntBASIC15.08■□□□□ 0.01
Col12a1Q60847 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.08■□□□□ 0.01
Col12a1Q60847 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col12a1Q60847 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.08■□□□□ 0
Col12a1Q60847 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.08■□□□□ 0
Col12a1Q60847 Gm8318-201ENSMUST00000182954 872 ntBASIC15.08■□□□□ 0
Col12a1Q60847 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.08■□□□□ 0
Col12a1Q60847 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.08■□□□□ 0
Col12a1Q60847 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.08■□□□□ 0
Col12a1Q60847 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col12a1Q60847 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col12a1Q60847 Gm42693-201ENSMUST00000196779 631 ntBASIC15.08■□□□□ 0
Col12a1Q60847 Gm45841-201ENSMUST00000207700 164 ntBASIC15.08■□□□□ 0
Col12a1Q60847 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.08■□□□□ 0
Col12a1Q60847 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Col12a1Q60847 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.07■□□□□ 0
Col12a1Q60847 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Col12a1Q60847 Gm15678-201ENSMUST00000117573 960 ntBASIC15.07■□□□□ 0
Col12a1Q60847 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.07■□□□□ 0
Col12a1Q60847 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.07■□□□□ 0
Col12a1Q60847 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Col12a1Q60847 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.07■□□□□ 0
Col12a1Q60847 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Gm9719-201ENSMUST00000162765 543 ntBASIC15.07■□□□□ 0
Col12a1Q60847 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.07■□□□□ 0
Col12a1Q60847 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col12a1Q60847 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Col12a1Q60847 Gm13392-201ENSMUST00000117708 150 ntBASIC15.06■□□□□ 0
Col12a1Q60847 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.06■□□□□ 0
Col12a1Q60847 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col12a1Q60847 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.06■□□□□ 0
Col12a1Q60847 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col12a1Q60847 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.06■□□□□ 0
Col12a1Q60847 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.06■□□□□ 0
Col12a1Q60847 Gm18624-201ENSMUST00000220966 658 ntBASIC15.06■□□□□ 0
Col12a1Q60847 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col12a1Q60847 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.06■□□□□ 0
Col12a1Q60847 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col12a1Q60847 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col12a1Q60847 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms