Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7-2Q5R1I3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Gm33142-201ENSMUST00000193913 867 ntBASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav7-2Q5R1I3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav7-2Q5R1I3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7-2Q5R1I3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7-2Q5R1I3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7-2Q5R1I3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7-2Q5R1I3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms