Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm26039-201ENSMUST00000158152 144 ntBASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm10052-201ENSMUST00000168019 960 ntBASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm44430-201ENSMUST00000203376 995 ntBASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm7729-201ENSMUST00000050143 801 ntBASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mir5122-201ENSMUST00000175004 89 ntBASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mir1668-201ENSMUST00000184114 107 ntBASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav15-1-dv6-1Q5R1D2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms