Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3-3Q5R1C3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3-3Q5R1C3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3-3Q5R1C3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Efs-202ENSMUST00000227037 2540 ntBASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav3-3Q5R1C3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Gm12441-201ENSMUST00000121806 588 ntBASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav3-3Q5R1C3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms