Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Gm27618-201ENSMUST00000183671 60 ntBASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Gm27430-201ENSMUST00000184585 107 ntBASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Gm44333-201ENSMUST00000197168 107 ntBASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim41Q5NCC3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Gm7901-201ENSMUST00000120430 1597 ntBASIC26.68■■□□□ 1.86
Trim41Q5NCC3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Gm2272-201ENSMUST00000194903 582 ntBASIC26.68■■□□□ 1.86
Trim41Q5NCC3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim41Q5NCC3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 AC149294.4-201ENSMUST00000227870 882 ntBASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Trim41Q5NCC3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Rpph1-201ENSMUST00000175096 319 ntBASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC26.66■■□□□ 1.86
Trim41Q5NCC3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Gm44719-201ENSMUST00000206404 149 ntBASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC26.65■■□□□ 1.86
Trim41Q5NCC3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Gm16198-201ENSMUST00000118766 670 ntBASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Gm7774-201ENSMUST00000200064 533 ntBASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Gm43125-201ENSMUST00000201724 730 ntBASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Trim41Q5NCC3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trim41Q5NCC3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trim41Q5NCC3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trim41Q5NCC3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trim41Q5NCC3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.85
Trim41Q5NCC3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Trim41Q5NCC3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Gm9385-201ENSMUST00000117563 472 ntBASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms