Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rc3h1Q4VGL6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rc3h1Q4VGL6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rc3h1Q4VGL6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Gm17271-201ENSMUST00000165535 355 ntBASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.79■□□□□ 0.44
Rc3h1Q4VGL6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Prob1-201ENSMUST00000097619 3021 ntBASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rc3h1Q4VGL6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rc3h1Q4VGL6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms