Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm8318-201ENSMUST00000182954 872 ntBASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm11814-201ENSMUST00000119515 929 ntBASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm26083-201ENSMUST00000157904 193 ntBASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm9229-201ENSMUST00000222777 126 ntBASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Herc2Q4U2R1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Gm38266-201ENSMUST00000194931 421 ntBASIC9.03□□□□□ -0.96
Herc2Q4U2R1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Mir1894-201ENSMUST00000122802 81 ntBASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC9.03□□□□□ -0.96
Herc2Q4U2R1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Herc2Q4U2R1 Gm45865-201ENSMUST00000211815 945 ntBASIC9.02□□□□□ -0.96
Herc2Q4U2R1 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.02□□□□□ -0.96
Herc2Q4U2R1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.02□□□□□ -0.96
Herc2Q4U2R1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Herc2Q4U2R1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Gm40466-201ENSMUST00000212174 422 ntBASIC9.02□□□□□ -0.97
Herc2Q4U2R1 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Gm43758-201ENSMUST00000199500 367 ntBASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Gm7287-201ENSMUST00000205267 602 ntBASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.02□□□□□ -0.97
Herc2Q4U2R1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms