Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Syne3Q4FZC9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Syne3Q4FZC9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.42■□□□□ 0.22
Syne3Q4FZC9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne3Q4FZC9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Syne3Q4FZC9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm6257-201ENSMUST00000163864 910 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm8825-201ENSMUST00000182565 998 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm4518-201ENSMUST00000182638 718 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Syne3Q4FZC9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.4■□□□□ 0.22
Syne3Q4FZC9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.4■□□□□ 0.22
Syne3Q4FZC9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Syne3Q4FZC9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Syne3Q4FZC9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Syne3Q4FZC9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Syne3Q4FZC9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Syne3Q4FZC9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne3Q4FZC9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne3Q4FZC9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne3Q4FZC9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.38■□□□□ 0.21
Syne3Q4FZC9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Syne3Q4FZC9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Syne3Q4FZC9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms