Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Trim40Q3UWA4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim40Q3UWA4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim40Q3UWA4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim40Q3UWA4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim40Q3UWA4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim40Q3UWA4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim40Q3UWA4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim40Q3UWA4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms