Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkl5Q3UTQ8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdkl5Q3UTQ8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Cdkl5Q3UTQ8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cdkl5Q3UTQ8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cdkl5Q3UTQ8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cdkl5Q3UTQ8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44357-201ENSMUST00000195897 142 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm19658-201ENSMUST00000196231 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44367-201ENSMUST00000196836 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44350-201ENSMUST00000197197 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44390-201ENSMUST00000197533 144 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44313-201ENSMUST00000198018 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44486-201ENSMUST00000198508 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44314-201ENSMUST00000199263 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44394-201ENSMUST00000199558 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44484-201ENSMUST00000199873 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44466-201ENSMUST00000200264 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gm44359-201ENSMUST00000200671 138 ntBASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkl5Q3UTQ8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Gm27646-201ENSMUST00000183989 110 ntBASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Gm6296-201ENSMUST00000222599 943 ntBASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Cdkl5Q3UTQ8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Gm17971-201ENSMUST00000190239 806 ntBASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkl5Q3UTQ8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms