Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b2Q3UJB0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Sf3b2Q3UJB0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Gm13829-201ENSMUST00000119600 138 ntBASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b2Q3UJB0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Gm12091-201ENSMUST00000146791 830 ntBASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.86■□□□□ 0.77
Sf3b2Q3UJB0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Gm9908-201ENSMUST00000211534 448 ntBASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sf3b2Q3UJB0 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Gm15824-201ENSMUST00000119516 955 ntBASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sf3b2Q3UJB0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sf3b2Q3UJB0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms