Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm18063-201ENSMUST00000208529 568 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Gm18052-201ENSMUST00000208750 559 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Gm27243-201ENSMUST00000183964 521 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Gm18753-201ENSMUST00000201000 566 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Spg11Q3UHA3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Spg11Q3UHA3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.1□□□□□ -0.15
Spg11Q3UHA3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Spg11Q3UHA3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms