Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddb1Q3U1J4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddb1Q3U1J4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddb1Q3U1J4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Gm27920-201ENSMUST00000183953 96 ntBASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ddb1Q3U1J4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Gm15321-201ENSMUST00000121290 288 ntBASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Gm28631-201ENSMUST00000190740 334 ntBASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddb1Q3U1J4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Ddb1Q3U1J4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ddb1Q3U1J4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ddb1Q3U1J4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ddb1Q3U1J4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ddb1Q3U1J4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Gm12859-201ENSMUST00000117834 427 ntBASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 CT010506.4-201ENSMUST00000225457 351 ntBASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ddb1Q3U1J4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.5■□□□□ 0.71
Ddb1Q3U1J4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Gm25857-201ENSMUST00000082788 129 ntBASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.49■□□□□ 0.71
Ddb1Q3U1J4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddb1Q3U1J4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Ddb1Q3U1J4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC19.48■□□□□ 0.71
Ddb1Q3U1J4 Gm24694-201ENSMUST00000180054 110 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms