Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 Gm27702-201ENSMUST00000184512 56 ntBASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Khdc4Q3TCX3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
Khdc4Q3TCX3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Gm14140-201ENSMUST00000119999 995 ntBASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Gm6736-201ENSMUST00000166583 948 ntBASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Khdc4Q3TCX3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.69□□□□□ -0.06
Khdc4Q3TCX3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.68□□□□□ -0.06
Khdc4Q3TCX3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms