Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cul4aQ3TCH7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 AA414768-201ENSMUST00000121924 1257 ntBASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cul4aQ3TCH7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Efs-202ENSMUST00000227037 2540 ntBASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cul4aQ3TCH7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.22■□□□□ 0.19
Cul4aQ3TCH7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cul4aQ3TCH7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms