Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm13813-201ENSMUST00000120998 787 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm7446-201ENSMUST00000221035 1240 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Abhd11os-203ENSMUST00000222613 363 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm3222-201ENSMUST00000071282 990 ntBASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ush2AQ2QI47 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 AC154846.1-201ENSMUST00000226278 862 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm14722-201ENSMUST00000118943 689 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm43058-201ENSMUST00000197645 625 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Mir433-201ENSMUST00000093564 124 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm11793-201ENSMUST00000120433 981 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 D9Wsu149-201ENSMUST00000214169 594 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm8652-201ENSMUST00000181363 964 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Gm7895-201ENSMUST00000187459 1173 ntBASIC8.1□□□□□ -1.11
Ush2AQ2QI47 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Ush2AQ2QI47 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm18307-201ENSMUST00000206864 949 ntBASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm16476-201ENSMUST00000221544 139 ntBASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Ush2AQ2QI47 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms