Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rab42Q0PD08 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Rab42Q0PD08 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab42Q0PD08 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab42Q0PD08 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab42Q0PD08 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab42Q0PD08 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab42Q0PD08 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Rab42Q0PD08 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab42Q0PD08 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.71□□□□□ -0.22
Rab42Q0PD08 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rab42Q0PD08 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Efs-202ENSMUST00000227037 2540 ntBASIC13.7□□□□□ -0.22
Rab42Q0PD08 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Rab42Q0PD08 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rab42Q0PD08 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Gm26039-201ENSMUST00000158152 144 ntBASIC13.69□□□□□ -0.22
Rab42Q0PD08 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Gm44450-201ENSMUST00000199528 114 ntBASIC13.69□□□□□ -0.22
Rab42Q0PD08 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.69□□□□□ -0.22
Rab42Q0PD08 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.69□□□□□ -0.22
Rab42Q0PD08 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rab42Q0PD08 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.68□□□□□ -0.22
Rab42Q0PD08 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rab42Q0PD08 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms