Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm10499-201ENSMUST00000174094 934 ntBASIC17.5■□□□□ 0.39
GabpaQ00422 Rpph1-201ENSMUST00000175096 319 ntBASIC17.5■□□□□ 0.39
GabpaQ00422 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.5■□□□□ 0.39
GabpaQ00422 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.5■□□□□ 0.39
GabpaQ00422 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GabpaQ00422 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
GabpaQ00422 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.49■□□□□ 0.39
GabpaQ00422 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.49■□□□□ 0.39
GabpaQ00422 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.49■□□□□ 0.39
GabpaQ00422 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Gm16198-201ENSMUST00000118766 670 ntBASIC17.49■□□□□ 0.39
GabpaQ00422 Gm13365-201ENSMUST00000121188 973 ntBASIC17.49■□□□□ 0.39
GabpaQ00422 Gm11025-201ENSMUST00000140773 466 ntBASIC17.49■□□□□ 0.39
GabpaQ00422 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.49■□□□□ 0.39
GabpaQ00422 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.49■□□□□ 0.39
GabpaQ00422 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.49■□□□□ 0.39
GabpaQ00422 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GabpaQ00422 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.49■□□□□ 0.39
GabpaQ00422 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.49■□□□□ 0.39
GabpaQ00422 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
GabpaQ00422 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GabpaQ00422 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
GabpaQ00422 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GabpaQ00422 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
GabpaQ00422 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.48■□□□□ 0.39
GabpaQ00422 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Gm14701-201ENSMUST00000117156 348 ntBASIC17.48■□□□□ 0.39
GabpaQ00422 Gm9385-201ENSMUST00000117563 472 ntBASIC17.48■□□□□ 0.39
GabpaQ00422 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.48■□□□□ 0.39
GabpaQ00422 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GabpaQ00422 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.48■□□□□ 0.39
GabpaQ00422 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.48■□□□□ 0.39
GabpaQ00422 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
GabpaQ00422 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.48■□□□□ 0.39
GabpaQ00422 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
GabpaQ00422 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.48■□□□□ 0.39
GabpaQ00422 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.48■□□□□ 0.39
GabpaQ00422 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GabpaQ00422 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.47■□□□□ 0.39
GabpaQ00422 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.47■□□□□ 0.39
GabpaQ00422 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
GabpaQ00422 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.47■□□□□ 0.39
GabpaQ00422 Gm2272-201ENSMUST00000194903 582 ntBASIC17.47■□□□□ 0.39
GabpaQ00422 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.47■□□□□ 0.39
GabpaQ00422 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.47■□□□□ 0.39
GabpaQ00422 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
GabpaQ00422 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GabpaQ00422 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GabpaQ00422 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GabpaQ00422 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GabpaQ00422 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GabpaQ00422 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GabpaQ00422 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms