Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.01□□□□□ -0.33
Npas1P97459 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.01□□□□□ -0.33
Npas1P97459 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.01□□□□□ -0.33
Npas1P97459 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npas1P97459 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13□□□□□ -0.33
Npas1P97459 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13□□□□□ -0.33
Npas1P97459 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Npas1P97459 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Npas1P97459 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Gm43353-201ENSMUST00000199224 1295 ntBASIC13□□□□□ -0.33
Npas1P97459 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Gm18115-201ENSMUST00000221209 621 ntBASIC13□□□□□ -0.33
Npas1P97459 Odf3b-204ENSMUST00000227834 930 ntBASIC13□□□□□ -0.33
Npas1P97459 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Npas1P97459 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Npas1P97459 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npas1P97459 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13□□□□□ -0.33
Npas1P97459 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Npas1P97459 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Npas1P97459 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.99□□□□□ -0.33
Npas1P97459 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Npas1P97459 Gm36967-201ENSMUST00000193814 266 ntBASIC12.99□□□□□ -0.33
Npas1P97459 Gm18421-201ENSMUST00000204122 625 ntBASIC12.99□□□□□ -0.33
Npas1P97459 Gm7370-201ENSMUST00000219471 767 ntBASIC12.99□□□□□ -0.33
Npas1P97459 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Npas1P97459 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Npas1P97459 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Npas1P97459 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npas1P97459 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Npas1P97459 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Npas1P97459 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Npas1P97459 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Gm11539-201ENSMUST00000119837 557 ntBASIC12.98□□□□□ -0.33
Npas1P97459 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms