Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.24□□□□□ -0.13
Cacna1aP97445 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cacna1aP97445 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cacna1aP97445 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Gm44719-201ENSMUST00000206404 149 ntBASIC14.23□□□□□ -0.13
Cacna1aP97445 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.23□□□□□ -0.13
Cacna1aP97445 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.23□□□□□ -0.13
Cacna1aP97445 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.23□□□□□ -0.13
Cacna1aP97445 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.23□□□□□ -0.13
Cacna1aP97445 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cacna1aP97445 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.22□□□□□ -0.13
Cacna1aP97445 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cacna1aP97445 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Cacna1aP97445 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cacna1aP97445 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Gm18062-201ENSMUST00000208020 547 ntBASIC14.22□□□□□ -0.13
Cacna1aP97445 Gm18055-201ENSMUST00000208254 547 ntBASIC14.22□□□□□ -0.13
Cacna1aP97445 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.22□□□□□ -0.13
Cacna1aP97445 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.22□□□□□ -0.13
Cacna1aP97445 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.22□□□□□ -0.13
Cacna1aP97445 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cacna1aP97445 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.21□□□□□ -0.13
Cacna1aP97445 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cacna1aP97445 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cacna1aP97445 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms