Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43cP86449 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim43cP86449 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim43cP86449 Gm11452-201ENSMUST00000122376 690 ntBASIC16.79■□□□□ 0.28
Trim43cP86449 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.79■□□□□ 0.28
Trim43cP86449 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim43cP86449 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43cP86449 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim43cP86449 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim43cP86449 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim43cP86449 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim43cP86449 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Trim43cP86449 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim43cP86449 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim43cP86449 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim43cP86449 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim43cP86449 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43cP86449 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim43cP86449 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43cP86449 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43cP86449 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43cP86449 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43cP86449 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim43cP86449 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43cP86449 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.77■□□□□ 0.28
Trim43cP86449 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.77■□□□□ 0.28
Trim43cP86449 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim43cP86449 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43cP86449 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43cP86449 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim43cP86449 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim43cP86449 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim43cP86449 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Trim43cP86449 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim43cP86449 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim43cP86449 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim43cP86449 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim43cP86449 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.76■□□□□ 0.27
Trim43cP86449 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim43cP86449 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim43cP86449 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim43cP86449 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.75■□□□□ 0.27
Trim43cP86449 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Trim43cP86449 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trim43cP86449 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim43cP86449 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.75■□□□□ 0.27
Trim43cP86449 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Trim43cP86449 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim43cP86449 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim43cP86449 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms