Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.05□□□□□ -0.64
Cks1bP61025 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cks1bP61025 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.05□□□□□ -0.64
Cks1bP61025 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cks1bP61025 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cks1bP61025 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Cks1bP61025 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cks1bP61025 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.05□□□□□ -0.64
Cks1bP61025 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cks1bP61025 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cks1bP61025 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Trmt13-210ENSMUST00000198454 880 ntBASIC11.04□□□□□ -0.64
Cks1bP61025 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.04□□□□□ -0.64
Cks1bP61025 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cks1bP61025 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cks1bP61025 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.04□□□□□ -0.64
Cks1bP61025 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cks1bP61025 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.04□□□□□ -0.64
Cks1bP61025 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cks1bP61025 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1bP61025 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.03□□□□□ -0.64
Cks1bP61025 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Gm12085-201ENSMUST00000119263 940 ntBASIC11.03□□□□□ -0.64
Cks1bP61025 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.03□□□□□ -0.64
Cks1bP61025 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1bP61025 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms